Quanterix Releases Financial Results for the Third Quarter of 2025
BILLERICA, Mass.--( BUSINESS WIRE)--Quanterix Corporation (NASDAQ: QTRX), a company transforming healthcare by accelerating biomarker breakthroughs from discovery to diagnostics, today announced financial results for the third quarter ended September 30, 2025.
“During the third quarter, we delivered on our revenue expectations despite challenging market conditions,” said Masoud Toloue, Chief Executive Officer of Quanterix. “Equally important, we achieved key integration milestones from our Akoya transaction — keeping us firmly on track to realize $85 million in annualized synergies and reach cash flow break-even in 2026. Together, we have built a stronger, more scalable company with the foundation to drive sustained growth, profitability, and cash flow in the years ahead.”
“Our Alzheimer’s diagnostics business also continues to accelerate. With a positive Medicare pricing recommendation and expanding partnerships across Asia, we are advancing toward a future where blood-based testing for neurodegenerative disease becomes standard clinical practice — and Quanterix is at the center of that transformation.”
Third Quarter Financial Highlights
Operational and Business Highlights
2025 Full Year Business Outlook
The Company is reiterating its previous guidance for 2025 revenues to be in a range of $130 to $135 million, which includes approximately two quarters of performance from Akoya. On a pro forma basis, assuming the two companies were combined for the full year, the Company expects to generate 2025 revenue of between $165 and $170 million.
Quanterix expects GAAP and adjusted gross margin (non-GAAP) to be in the range of 45% to 47%.
Finally, the Company anticipates 2025 adjusted cash usage to be approximately $34 to $38 million. With the previously announced expense reductions, Quanterix expects to exit 2025 with approximately $120 million in cash, cash equivalents, marketable securities, and restricted cash and expects to achieve cash flow breakeven performance in 2026.
Conference Call
In conjunction with this announcement, the Company will host a conference call on November 10, 2025, at 4:30 PM E.T. The dial-in number for USA & Canada is Toll-Free (800) 715-9871 or (646) 307-1963 and the conference ID is 5591565.
Interested investors can also listen to the live webcast from the Event Details page in the Investors section of the Quanterix website at https://ir.quanterix.com. An archived webcast replay will be available on the Company’s website for one year.
About Quanterix
Quanterix is a global leader in ultra-sensitive biomarker detection, enabling breakthroughs in disease research, diagnostics, and drug development. Its proprietary Simoa® technology delivers industry-leading sensitivity, allowing researchers to detect and quantify biomarkers in blood and other fluids at concentrations far below traditional limits. With approximately 6,000 peer-reviewed publications, Quanterix has been a trusted partner to the scientific community for nearly two decades. In 2025, Quanterix acquired Akoya Biosciences, The Spatial Biology Company®, adding multiplexed tissue imaging with single-cell resolution to its portfolio and 1,396 installed instruments. Together, the combined company offers a uniquely integrated platform that connects biology across blood and tissue—advancing precision medicine from discovery to diagnostics. Learn more at www.quanterix.com.
Financial Highlights
QUANTERIX CORPORATION
CONSOLIDATED STATEMENTS OF OPERATIONS
(amounts in thousands, except per share data, unaudited)
Three Months Ended September 30,
Nine Months Ended September 30,
2025
2024
2025
2024
Revenues:
Product revenue
$
26,151
$
19,694
$
63,723
$
59,251
Service and other revenue
13,953
$
13,845
29,806
$
39,323
Collaboration and license revenue
46
$
1,872
1,348
$
2,756
Grant revenue
83
$
402
165
$
930
Total revenues
40,233
35,813
95,042
102,260
Costs of goods sold and services:
Cost of product revenue
15,379
$
10,554
34,438
$
25,461
Cost of service and other revenue
7,648
$
5,106
15,683
$
15,864
Total costs of goods sold and services
23,027
15,660
50,121
41,325
Gross profit
17,206
20,153
44,921
60,935
Operating expenses:
Research and development
8,009
$
8,104
27,126
23,015
Selling, general and administrative
39,062
$
22,908
102,872
73,027
Other lease costs
286
$
889
870
2,740
Impairment and restructuring costs
7,174
—
14,844
—
Total operating expenses
54,531
31,901
145,712
98,782
Loss from operations
(37,325
)
(11,748
)
(100,791
)
(37,847
)
Other income (expense):
Interest income
1,448
3,535
7,408
11,165
Change in fair value of contingent liabilities
58
—
3,952
—
Other income (expense), net
(178
)
5
(68
)
221
Loss before income taxes
(35,997
)
(8,208
)
(89,499
)
(26,461
)
Income tax benefit (expense)
2,480
(145
)
5,466
(442
)
Net loss
$
(33,517
)
$
(8,353
)
$
(84,033
)
$
(26,903
)
Net loss per common share, basic and diluted
$
(0.73
)
$
(0.22
)
$
(2.04
)
$
(0.70
)
Weighted-average common shares outstanding, basic and diluted
46,060
38,449
41,243
38,305
QUANTERIX CORPORATION
CONSOLIDATED BALANCE SHEETS
(amounts in thousands, except per share data, unaudited)
September 30, 2025
December 31, 2024
ASSETS
Current assets:
Cash and cash equivalents
$
38,298
$
56,709
Marketable securities
96,511
232,413
Accounts receivable, net of allowance for expected credit losses
33,029
32,141
Inventory
54,957
32,775
Prepaid expenses and other current assets
10,483
9,556
Total current assets
233,278
363,594
Restricted cash
3,336
2,610
Property and equipment, net
25,765
17,150
Intangible assets, net
135,148
4,031
Goodwill
23,460
—
Operating lease right-of-use assets
18,184
16,339
Financing lease right-of-use assets
917
—
Other non-current assets
4,052
2,809
Total assets
$
444,140
406,533
LIABILITIES AND STOCKHOLDERS' EQUITY
Current liabilities:
Accounts payable
$
10,633
6,953
Accrued compensation and benefits
12,582
12,620
Accrued expenses and other current liabilities
24,812
8,851
Deferred revenue
20,913
8,827
Operating lease liabilities
7,984
4,756
Financing lease liabilities
428
—
Total current liabilities
77,352
42,007
Deferred revenue, net of current portion
7,341
1,073
Operating lease liabilities, net of current portion
31,212
32,615
Financing lease liabilities, net of current portion
496
—
Non-current portion of contingent liabilities
5,904
—
Other non-current liabilities
7,301
800
Total liabilities
129,606
76,495
Total stockholders’ equity
314,534
330,038
Total liabilities and stockholders’ equity
$
444,140
$
406,533
QUANTERIX CORPORATION
CONSOLIDATED STATEMENTS OF CASH FLOWS
(amounts in thousands, unaudited)
Nine Months Ended September 30,
2025
2024
Cash flows from operating activities:
Net loss
$
(84,033
)
$
(26,903
)
Adjustments to reconcile net loss to net cash used in operating activities:
Depreciation and amortization expense
9,618
4,740
Credit losses on accounts receivable
284
744
Accretion of marketable securities
(1,851
)
(5,317
)
Impairment
7,269
—
Operating lease right-of-use asset amortization
2,058
1,371
Stock-based compensation expense
16,303
15,150
Change in fair value of contingent liabilities
(3,952
)
—
Deferred taxes
(5,678
)
—
Other operating activity
(76
)
(389
)
Changes in assets and liabilities:
Accounts receivable
7,901
(6,402
)
Inventory
4,204
(6,845
)
Prepaid expenses and other current assets
2,198
(168
)
Other non-current assets
110
(479
)
Accounts payable
(3,537
)
588
Accrued compensation and benefits, accrued expenses, and other current liabilities
(5,847
)
(3,166
)
Deferred revenue
(526
)
(826
)
Operating lease liabilities
(4,003
)
(2,971
)
Other non-current liabilities
(1,234
)
11
Net cash used in operating activities
(60,792
)
(30,862
)
Cash flows from investing activities:
Purchases of marketable securities
(45,658
)
(270,972
)
Proceeds from sales and maturities of marketable securities
183,389
159,279
Purchases of property and equipment
(2,710
)
(2,956
)
Acquisitions, net of cash acquired
(93,229
)
—
Net cash provided by (used in) investing activities
41,792
(114,649
)
Cash flows from financing activities:
Principal payments on financing leases
(106
)
—
Proceeds from common stock issued under stock plans
930
2,999
Payments for employee taxes withheld on stock-based compensation awards
(1,010
)
(2,584
)
Net cash provided by (used in) financing activities
(186
)
415
Net increase (decrease) in cash, cash equivalents, and restricted cash
(19,186
)
(145,096
)
Effect of exchange rate changes on cash, cash equivalents, and restricted cash
1,501
18
Cash, cash equivalents, and restricted cash at beginning of period
59,319
177,026
Cash, cash equivalents, and restricted cash at end of period
$
41,634
$
31,948
Use of Non-GAAP Financial Measures
To supplement our financial statements presented on a U.S. GAAP basis, we present the following non-GAAP financial measures:
We believe that presentation of these non-GAAP financial measures provides supplemental information useful to investors in understanding our underlying operating results and trends. We use these non-GAAP financial measures to evaluate our operating performance in a manner that allows for meaningful period-to-period comparison and analysis of trends in our business and our competitors. We believe that presentation of these non-GAAP financial measures provides useful information to investors in assessing our operating performance within our industry and to allow comparability with the presentation of other companies in our industry.
The non-GAAP financial measures presented here should be considered in conjunction with, and not as a substitute for, the financial information presented in accordance with U.S. GAAP. For example, adjusted EBITDA excludes a number of expense items that are included in net loss and adjusted cash usage excludes certain actual cash payments. As a result, positive adjusted EBITDA or positive adjusted cash usage may be achieved even where we record a significant net loss or reduction in our cash and marketable securities balances in accordance with U.S. GAAP.
Investors are encouraged to review the reconciliation of these non-GAAP financial measures to their most directly comparable GAAP financial measures set forth in the tables captioned “Reconciliation of GAAP to Non-GAAP Financial Measures” in the section below.
Additionally, we make certain forward-looking statements about our future financial performance that include non-GAAP financial measures, which are difficult to predict for future periods because the nature of the adjustments pertains to events that have not yet occurred. We do not forecast many of the excluded items for internal use and therefore information reconciling forward-looking non-GAAP financial measures to U.S. GAAP financial measures is not available without unreasonable effort and is not provided. The occurrence, timing, and amount of any of the items excluded from U.S. GAAP to calculate non-GAAP financial measures could significantly impact our U.S. GAAP results.
QUANTERIX CORPORATION
RECONCILIATIONS OF GAAP TO NON-GAAP FINANCIAL MEASURES
Reconciliation of Net Loss to Adjusted EBITDA (non-GAAP) and Adjusted EBITDA Margin (non-GAAP)
(Unaudited, amounts in thousands except percentages)
Three Months Ended September 30,
Nine Months Ended September 30,
2025
2024
2025
2024
Net loss
$
(33,517
)
$
(8,353
)
$
(84,033
)
$
(26,903
)
Interest income
(1,448
)
(3,535
)
(7,408
)
(11,165
)
Income tax expense (benefit)
(2,480
)
145
(5,466
)
442
Depreciation and amortization
5,431
1,616
9,618
4,740
Stock-based compensation expense
5,469
4,657
16,303
15,150
Acquisition and integration related costs (1)
7,315
—
15,032
—
Earnout recorded as compensation expense (2)
229
—
8,129
—
Changes in contingent liabilities (3)
(58
)
—
(3,952
)
—
Impairment and restructuring costs (4)
7,174
—
14,844
—
Adjusted EBITDA (non-GAAP)
$
(11,885
)
$
(5,470
)
$
(36,933
)
$
(17,736
)
Total revenues
$
40,233
$
35,813
$
95,042
$
102,260
Adjusted EBITDA margin (non-GAAP) (adjusted EBITDA as a % of revenue)
(29.5
)%
(15.3
)%
(38.9
)%
(17.3
)%
(1)
(2)
(3)
(4)
Reconciliation of Net Increase (Decrease) in Cash, Cash Equivalents, and Restricted Cash to Adjusted Cash Usage (non-GAAP)
(Unaudited, amounts in thousands)
Three Months Ended September 30,
Nine Months Ended September 30,
2025
2024
2025
2024
Net increase (decrease) in cash, cash equivalents, and restricted cash
$
(93,949
)
$
(18,032
)
$
(19,186
)
$
(145,096
)
Effect of exchange rate changes on cash, cash equivalents, and restricted cash
45
371
1,501
18
Net change in marketable securities
(31,765
)
14,331
(135,902
)
117,282
Cash usage
(125,669
)
(3,330
)
(153,587
)
(27,796
)
Adjustments:
Cash acquired from acquisitions
(16,799
)
—
(16,822
)
—
Acquisition and integration related payments (1)
120,310
—
134,387
—
Payments of restructuring costs (2)
6,095
—
7,075
—
Payments related to restatement costs (3)
—
—
1,102
—
Adjusted cash usage (non-GAAP)
$
(16,063
)
$
(3,330
)
$
(27,845
)
$
(27,796
)
(1)
(2)
(3)
Reconciliation of Gross Profit, Gross Margin, Total Operating Expenses and Loss from Operations to
Non-GAAP Financial Measures
(Unaudited, amounts in thousands except percentages)
Three Months Ended September 30,
Nine Months Ended September 30,
2025
2024
2025
2024
Gross profit
$
17,206
$
20,153
$
44,921
$
60,935
Shipping and handling costs
(1,305
)
(2,011
)
(4,181
)
(6,228
)
Purchase accounting impact on inventory and property and equipment (1)
35
—
35
—
Amortization of acquired intangible assets (2)
2,532
—
2,993
—
Adjusted gross profit (non-GAAP)
18,468
18,142
43,768
54,707
Total revenues
$
40,233
$
35,813
$
95,042
$
102,260
Gross margin (gross profit as % of total revenues)
42.8
%
56.3
%
47.3
%
59.6
%
Adjusted gross margin (non-GAAP) (adjusted gross profit as % of total revenues)
45.9
%
50.7
%
46.1
%
53.5
%
Total operating expenses
$
54,531
$
31,901
$
145,712
$
98,782
Shipping and handling costs
(1,305
)
(2,011
)
(4,181
)
(6,228
)
Purchase accounting impact on property and equipment (1)
(212
)
—
(212
)
—
Amortization of acquired intangible assets (2)
(73
)
—
(73
)
—
Acquisition and integration related costs (3)
(7,315
)
—
(15,032
)
—
Earnout recorded as compensation expense (4)
(229
)
—
(8,129
)
—
Impairment and restructuring costs (5)
(7,174
)
—
(14,844
)
—
Adjusted total operating expenses (non-GAAP)
$
38,223
$
29,890
$
103,241
$
92,554
Loss from operations
$
(37,325
)
$
(11,748
)
$
(100,791
)
$
(37,847
)
Purchase accounting impact on inventory and property and equipment (1)
247
—
247
—
Amortization of acquired intangible assets (2)
2,605
—
3,066
—
Acquisition and integration related costs (3)
7,315
—
15,032
—
Earnout recorded as compensation expense (4)
229
—
8,129
—
Impairment and restructuring costs (5)
7,174
—
14,844
—
Adjusted loss from operations (non-GAAP)
$
(19,755
)
$
(11,748
)
$
(59,473
)
$
(37,847
)
(1)
(2)
(3)
(4)
(5)
CAUTIONARY STATEMENT REGARDING FORWARD-LOOKING STATEMENTS
Statements included in this press release that are not historical in nature or do not relate to current facts are intended to be, and are hereby identified as, forward-looking statements for purposes of the safe harbor provided by Section 27A of the Securities Act of 1933, as amended, and Section 21E of the Securities Exchange Act of 1934, as amended. Forward-looking statements include, among other things, statements about Quanterix’s future business outlook, operations, strategy and financial performance, including statements related to our expectations about the development and commercialization of our products, about the benefits we may realize from the acquisition of Akoya Biosciences Inc., and under the header “2025 Full Year Business Outlook.”. Words and phrases such as “may,” “approximately,” “continue,” “should,” “expects,” “projects,” “anticipates,” “is likely,” “look ahead,” “look forward,” “believes,” “will,” “intends,” “estimates,” “strategy,” “plan,” “could,” “potential,” “possible” and variations of such words and similar expressions are intended to identify such forward-looking statements. Forward-looking statements are subject to certain risks and uncertainties that are difficult to predict with regard to, among other things, timing, extent, likelihood and degree of occurrence, which could cause actual results to differ materially from anticipated results. Such risks and uncertainties include, among others, the following possibilities with respect to Quanterix’s future business, operations, strategy and financial performance: risks related to the impact of recent U.S. government policies, including reductions in federal research funding and increased tariffs; risks that we may not realize the expected benefits of our cost reduction actions; risks associated with the anticipated timing for launch of, and features of, Quanterix’s next-generation instrument, Simoa One; risks that Quanterix may fail to realize the anticipated benefits and synergies of its recent acquisitions of Emission, Inc. and Akoya Biosciences Inc.; risk that integrating Quanterix’s business with that of Akoya could be more difficult, costly or time-consuming than expected; Quanterix risks that Quanterix’s estimates regarding expenses, future revenues, capital requirements, and needs for additional financing could be incorrect; risks related to the restatement of Quanterix’s consolidated financial statements, including risks of increased costs and the increased possibility of legal proceedings and regulatory inquiries, sanctions, or investigation; risks related to Quanterix’s ability to maintain effective internal control over financial reporting and disclosure controls and procedures, including its ability to remediate existing material weaknesses in its internal control over financial reporting and the timing of any such remediation; risks related to defects or other quality issues in Quanterix’s products that could lead to unforeseen costs, product recalls, adverse regulatory actions, negative publicity and litigation; risks related to Quanterix’s ability to retain and expand its customer base and achieve sufficient market acceptance of its products; and other factors that may affect future results of Quanterix. Additional factors that could cause results to differ materially from those described above can be found in the periodic reports filed by Quanterix with the SEC, including the “Risk Factors” sections contained therein, which are available on the SEC’s website at www.sec.gov.
All forward-looking statements, expressed or implied, included in this press release are expressly qualified in their entirety by the cautionary statements contained or referred to herein. If one or more events related to these or other risks or uncertainties materialize, or if Quanterix’s underlying assumptions prove to be incorrect, actual results may differ materially from what Quanterix anticipates. Quanterix cautions readers not to place undue reliance on any such forward-looking statements, which speak only as of the date they are made and are based on information available at that time. Quanterix does not assume any obligation to update or otherwise revise any forward-looking statements to reflect circumstances or events that occur after the date the forward-looking statements were made or to reflect the occurrence of unanticipated events except as required by federal securities laws.